Measuring and simulating pH buffer capacity of calcareous soils using empirical and mechanistic models

ABSTRACT

We studied (i) the pH buffer capacity (pHBC) of calcareous soils varied widely in calcite and texture, (ii) the contribution of soil properties to pHBC and (iii) the significance of using a model based on calcite dissolution to estimate the pHBC of calcareous soils. The pHBC of soils was measured by adding several rates of HCl to soils (100–6500 mM H⁺ kg^–1), in a 0.01 M CaCl₂ background and an equilibration time of 24 h. The pHBC (mM H⁺ kg^–1 pH^?1) varied from 55 to 3383, with the mean of 1073. The pHBC of the soils was strongly correlated with soil CaCO₃ equivalent (calcite) (r = 0.94), sand (r = ?0.72), silt (r = 0.60), EC (r = 0.63), pH (r = 0.55), and weakly (r = 0.37) but significantly with clay content. The attained pHBC values indicated that calcite was probably the main buffer system in these soils. The chemical equilibrium model successfully predicted pH titration curves based on calcite dissolution, indicating buffering of acid inputs in the calcareous soils is dominated by calcite dissolution. The model can be used to simulate acidification of calcareous soils and to provide information for making environmental management decisions.     

Molecular characterization of a 13-amino acid deletion in VP1 (1D) protein and novel amino acid substitutions in 3D polymerase protein of foot and mouth disease virus subtype A/Iran87

The nucleotide sequence of the VP1 (1D) and partial 3D polymerase (3D^pol) coding regions of the foot and mouth disease virus (FMDV) vaccine strain A/Iran87, a highly passaged isolate (~150 passages), was determined and aligned with previously published FMDV serotype A sequences. Overall analysis of the amino acid substitutions revealed that the partial 3D^pol coding region contained four amino acid alterations. Amino acid sequence comparison of the VP1 coding region of the field isolates revealed deletions in the highly passaged Iranian isolate (A/Iran87). The prominent G-H loop of the FMDV VP1 protein contains the conserved arginine-glycine-aspartic acid (RGD) tripeptide, which is a well-known ligand for a specific cell surface integrin. Despite losing the RGD sequence of the VP1 protein and an Asp₂₆→Glu substitution in a beta sheet located within a small groove of the 3D^pol protein, the virus grew in BHK 21 suspension cell cultures. Since this strain has been used as a vaccine strain, it may be inferred that the RGD deletion has no critical role in virus attachment to the cell during the initiation of infection. It is probable that this FMDV subtype can utilize other pathways for cell attachment.     

Identification and characterization of a <Emphasis Type="Italic">Streptomyces</Emphasis> sp. isolate exhibiting activity against multidrug-resistant coagulase-negative Staphylococci

The resistance of 220 coagulase-negative Staphylococci (CNS) (associated with animal disease) to 13 antibiotics were determined using the disk diffusion method. 35.9% of multidrug-resistant coagulase-negative Staphylococci (MR-CNS) exhibited resistance to five or more than five antibiotics; all of these bacteria were resistant to methicillin too. The new Streptomyces sp. ABRIINW111 was isolated from the Zagros Mountains Hamadan, Iran. The 16S rDNA sequence of the isolate indicated that it has 98% similarity to S. levis, but some mutations in the alpha and gamma regions of the 16S rDNA sequence emphasize the probability of the existence of a new species. Preliminary and secondary antibacterial screenings revealed that the isolate is active against gram negative and positive bacteria. The diethyl ether extracted metabolite of the Streptomyces sp. ABRIINW111 showed an effective antibacterial activity against MR-CNS. So the diethyl ether extract of the new Streptomyces sp. strain ABRIINW111 can inhibit the MR-CNS in vitro, and it can offer a new approach to treat MR-CNS infectious patients.     

Influence of idebenone on ram semen quality stored at 4°C

The current study was designed to investigate the effect of idebenone (Id), an antioxidant on ram semen quality. Semen samples were collected, pooled and diluted in a Tris‐based extender supplemented with 0, 1, 2, 4 and 8 µM idebenone. Computer‐assisted sperm analysis was used to evaluate spermatozoa kinematics. Sperm viability and membrane functionality were assessed respectively, by eosin‐nigrosin staining and HOS test. Biochemical assays were carried out to measure different metabolites in spermatozoa and medium at 0, 24, 48 and 72 hr. Total and forward progressive motility were greater in 1, 2 and 4 µM idebenone treated groups compared to control at 24, 48 and 72 hr time points (p < 0.05). Semen supplementation with Id significantly increased viability and functionality of spermatozoa membrane during storage (p < 0.05). Lower amounts of lipid hydroperoxides in medium and spermatozoa were observed in Id‐treated groups compared to control one at 24 and 48 hr of storage (p < 0.05). Medium and spermatozoa amounts of malondialdehyde and nitric oxide were less in Id 4 µM group compared to the control at 72 hr (p < 0.05). Total antioxidant capacity values and superoxide dismutase activity of spermatozoa and medium were greater in 2 and 4 µM idebenone treated groups in comparison with the control at 72 hr (p < 0.05). Results of the current study indicated that ram semen supplementation with Id at 4 µM level improved quality by ameliorating nitrosative and peroxidative stress, hence could be considered as an antioxidant additive during storage at 4°C.     

Epidemiological evaluation of Leishmania infantum zoonotic transmission risk in the recently established endemic area of Northwestern Italy

Leishmania infantum infection had been expanding into new areas due to changes in vector and host biology. Zoonotic visceral leishmaniasis has become endemic in previously unsuitable areas as vectors find favourable climatic conditions and an increasing number of reservoir dogs are moved between traditionally and new endemic areas. Monitoring vector and disease expansion in areas of recent colonization is needed to understand transmission mechanisms and patterns of disease establishment. Here, we studied the infection status of 815 human blood donors and of 803 sympatric dogs from five, newly endemic, areas in Northwestern Italy. In autochthonous dogs, the seroprevalence of anti‐L. infantum antibodies, recorded by Western blot, reached 42.22%, while in humans, the seroprevalence was of 16.81%. No significant correlation between the infection status of dogs and that of their human owners was found, but L. infantum infection was recorded in the different study areas with significant levels of diversity. Restriction fragment length polymorphism showed a high genetic variability of the circulating strains and gave useful insights on patterns of disease establishment into a naïve area.     

Plant community dynamics in arid lands: the role of desert ants

Ants (Formicidae, Hymenoptera) play an important role in seed bank, seedling establishment andplant composition of arid ecosystems. Thus, knowing plant-ant interaction provides useful information formanagers to design restoration and conservation plans. In this study, the roles of desert harvester ants (Messorintermedius and Messor melancholicus) and scavenger ants (Cataglyphis nodus and Lepisiota semenovi) on plantcommunities were investigated in arid ecosystems of southeastern Iran. Two vegetation types weredistinguished in the study area and the nest density of ant species was determined. Furthermore, plantcomposition and soil seed bank were estimated at different distances from the ant nests. Results showed thatthe density of M. intermedius and M. melancholicus nests was higher in dwarf shrub-shrub vegetation type and thedensity of C. nodus and L. semenovi nests was higher in dwarf shrub vegetation type. The harvester and scavengerants had enhanced the seed bank to 55% and 70%, respectively. Therefore, the role of scavenger ants on theplant communities' seed bank was greater than that of harvester ants. Although the scavenger ants were moreinfluential on the annuals and the invasive plant species, the radius impact of the harvester ants on theperennials was greater, i.e., a positive interaction existed between the perennial plants and the harvester ants. C.nodus and L. semenovi played an important role in enhancing the ecosystem's potential for restoration throughestablishment of pioneer species in early stage of succession. The activity of M. intermedius is crucial for thedevelopment and maintenance of climax plant communities in arid ecosystems through assisting the plantspecies' establishment in late stage of succession. It is essential to preserve the diversity of these key ant speciesfor the maintenance and sustainability of shrubs in arid ecosystems.     

Effects of drought stress and rewatering on antioxidant systems and relative water content in different growth stages of maize (Zea mays L.) hybrids

Drought is a problem of the expanding universe which seriously influences crop production and quality. Approximately one-third of the cultivated area of the world suffers from constantly inadequate supplies of water. The present study aimed to determine the effects of drought and rewatering on activities of antioxidant enzymes, chlorophyll, proline, and relative water contents (RWC). In this experiment, six maize hybrids (Sc260, Sc370, Sc500, Sc647, Sc700, and Sc704) were examined in a pot study during the maize-growing season of 2011. Results indicated that the growth of hybrids was retarded under drought stress conditions and regained growth speed during rewatering. RWC, chlorophyll, and carotenoid contents were markedly decreased by the water deficit and reached normal values during rewatering in Sc647, Sc704, and Sc700. Our findings also indicated significantly higher activity levels of peroxidase and catalase and proline content in water-stressed plants than in well-watered plants, which decreased when the plants were rewatered, showing an inverse relationship to gluthatione reductase activity. According to the results, the better upregulation of the protective mechanism in Sc704 and Sc647 probably induced higher drought resistance. We concluded that antioxidant enzyme activity could provide a useful tool for depicting drought tolerance in maize hybrids in arid and semiarid regions.     

SILICON NUTRITION AND PHYTOPHTHORA DRECHSLERI INFECTION EFFECTS ON GROWTH AND MINERAL NUTRIENTS CONCENTRATION,UPTAKE, AND RELATIVE TRANSLOCATION IN HYDROPONIC-GROWN CUCUMBER

A hydroponic experiment was performed to investigate silicon (Si) and Phytophthora drechsleri root rot effects on growth and tissue partitioning of Si, zinc (Zn), iron (Fe), and manganese (Mn) in two cucumber cultivars (Cucumis sativus L. cvs. ‘Dominus’ and ‘Super Dominus’). Root length, plant height, and root fresh weight were significantly decreased by P. drechsleri, which were all significantly alleviated by 1.0 mM Si. Increasing Si level in the nutrient solution was accompanied with its enhanced uptake by cucumbers. Plants infected with P. drechsleri transported lower Mn to shoot than non-infected plants. Influence of P. drechsleri infection on root Fe concentration was dependent on cucumber cultivar while a decrease in root Zn concentration was found in infected cucumbers. Silicon nutrition increased Zn and Fe uptake in both cucumber cultivars. It is suggested that Si nutrition improved the crop growth, particularly under biotic stress, and hereby, increased micronutrients uptake by cucumber.     

The effects of biological,chemical, and organic fertilizers application on root growth features and grain yield of Sorghum

Abstract

To investigate the effect of some biological and chemical fertilizers on the root physiological and growth indexes and also Sorghum grain yield, this study was carried out in randomized complete block design with three replicates. The treatments of the study included (1) arbuscular mycorrhizal fungus Glomus mosseae?+?vermicompost, (2) mycorrhiza fungus?+?Nitroxin, (3) mycorrhiza fungus+ Rhizobium sp., (4) mycorrhiza fungus?+?NPK chemical fertilizer (40-40-20), (5) mycorrhiza fungus, and (6) control treatment. The highest root colonization rate and specific root length were observed in the co-inoculation with mycorrhiza?+?Nitroxin treatment. The other root growth parameters were observed at the mycorrhiza?+?vermicompost treatment. Also the highest rate of Sorghum physiological growth indexes root such as root area index and net assimilation rate were belonged to the co-inoculation of mycorrhiza?+?Nitroxin treatment. The highest root growth rate and root relative growth rate were obtained in the mycorrhiza?+?vermicompost treatment. So it can be concluded that biological fertilizers can be used as an appropriate alternative for chemical fertilizers in sustainable agriculture system.     

Schwannoma of the External Auditory Canal in a Filly: A Case Report

Schwannomas of the external auditory canal (EAC) are exceedingly rare in human beings and domestic animals. Herein we describe the clinicopathological and immunohistochemical features of a benign schwannoma arising in the EAC of a 2.5-year-old filly. Microscopically, the mass showed a spindle cell tumor composed of hypocellular Antoni type B areas as a myxomatous arrangement of mesenchymal cells and hypercellular Antoni type A areas displaying short fascicles of densely packed neoplastic cells in the collagenous stroma. Immunohistochemically, the tumor cells were diffusely positive for S100 protein and vimentin but negative for Ki67. It was concluded that schwannomas should be included in the differential diagnosis of EAC masses, and immunohistochemical markers such as S100 protein can strongly help in differentiating this tumor from other spindle cell tumors.